Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943644.1_cds_XP_016486716.1_77528
CDS Infomation

[gene=LOC107806956] [db_xref=GeneID:107806956] [protein=stress response protein nst1-like] [protein_id=XP_016486716.1] [location=join(9649..9807,10983..11098,11201..11319,11536..11698,11785..12011,12238..12556,12726..14133)] [gbkey=CDS]
Sequence

ATGGCTGGAGATCTTGTTTTTACCCCTGAAGAAATGGTGATTGACAAGGGACTAGGATAC
CCAAAGGCCTATGCCAAGATCTGTAAAGACAGAAGCTTTGGCCCCTTCAGCCGCGGCCCT
CCTTTCGCTTTCACTCCCTATTCTCTACCACATCATGAGGTTTTGAGAGCCAAAGAATTG
GATGACATGTTCCCTATCATTGATCCAAATGCACAACCCAGTACAAAACCGAAGATTTTC
CTGTCTCTTTTGTGGAAGCAACTCAACCATCTCGGGAATGCAGGGTTTGATCCTGAAGTA
TTTCGAGTAGACTCATATGGCAATGTTCTGTATTATCATGCTGATTCAGCTTCACCTCTG
GCTTGGAAAATTGATCATTGGTTTCCTTGCTCCAGAGGAGGACTAACTGTTCCAAGCAAT
CTGAGGATAATGCAGTGGCAATCATGTAAGAAAAAGAATAATAAGCTGGAATTCCTTATA
CCCTGGTGGGATCTGCAAGTTGGTATATCCATAAACCAGTTCCTGTCCATCTTTGCTATA
TCAAATTCAGATTTCAGGCGCAGAGCATTTTCATGGTTGTTTTCTGAAGGTGAAAATGAA
GAACTGAATGCCTCACAAACTGTTGATTCCCATGTTTTTCCTCATCATTTTGTTGAATCG
CAAGAAAAGATTGGCCTGGCTCCAGCTGCTGTTGTTCTAAGTCGAAGAGAGTCTTTTGAT
TCTTCCTCTACTCTGAAATCCTTGGATATAAATAGAAGACCAAGATCAAACACTCCTATT
GTAGCTTACAAAAGATCAAAGGCGGATTTGAAAGAAAATGAAGATCCAGGCATGGTGACC
AATCCATACCAAGCTATTGTGATGGCTAGAGATTCTTTGAGACACAGAGAAGAGACTTCA
AAGATGCAGGCAGAAATTCAGAAATTAGACGATGAAGTGGGTGAATTAAAGCAAAAGACT
GAGGAGGAGAAAGCAGCCGTAGAAGAACTGGAGCTAGTCCTAATAAAGAAAAGGAGGAGA
GCAGAGAAATGTCGACGACTAGCTGAGGCACAATCTTCTTATAGAGCTATGCTAGAGAAG
ATGATTCGAGATGCCATGCACCAGAGTGTTGTGTATAAAGAACAAGTGAGGTTGAATCAG
GCAGCAGCTAATGCTCTTATGGCAAGACTTGAAGCTCAAAGAGCAATTTGTGATTCTGCA
GAGAGAGAGCTACACAAGAGATTCAAATATAGAGATGAACTCGAGCAACAGATAAGACCT
GAGTGGGACCAAACAAGAAAAAGATCAAGAATGGATGAATTTCCAGATGAAGAGGGAGAT
GAGAAGACTCTCCTCTGTCTTCCTGGCAGCAGCTCAAGGGCAGAATTAGAGAAAGATGAT
CAGAGAGTTCTATGCTTGCCAGGGATGAAGTCCAATGACAGTATGCATAAGGAACTAAGA
GTATTTCTGGACGAGGAGCAGAAAGCATATGAGGCAAGACTCTCTCTAAATGGAGGACAA
GAGAAAGAAAGACAAAGCGACAAGGCTATTGTGCAGGCAAAGGACGAGGATCCAACAGAG
AAGAAGATTCAAAATACAGAAATACAAGAAGAAGGGATAACATACAATGCCGGGTTTCCC
ACTTTTCATGAAGCTGAAAGAGAGGAGGAGGACGACGAGAGCAGAAAGCAACGTGGGAAA
GGAAATGTTGAAAAATGGCTTCAGTTGCTTTTGGATAACTCCCAAGAACCTACCAACTTT
AGTGTTCAGACTGCTGAGGAGAACAATAATGGTAAGAAAACACTTAATGCAGGAGAAGAT
GAAACTAATGAGATTGATGGCACGATAAGAAAGCAGAACATCAGACATCCACAGAACGAG
ATAAAGAAATCCAGATCAGAGGAGTCAGAAATAGCTGAGAAACAGCCGCAGAAAGCGGCC
AAACAGCTAGATAAAGAAATCCAGATCAGACATCCACAGAACGAGATAAAGAAATCCAGA
TCAGAGGAGTCAGAAATAGCTGAGGATGTGAAACAGCCACAGAAAGCGGCCAAACAGCTA
GAAGAAACAAAAAGAGAGGAAATTGTTGAAATGGCAGAGAGGAAATCATCATTTTCAAAC
AGAGAAATTGGAAAAAAAGAAGAAAGAACTGAGCTTAAAGGTCAAAAAACACCATCCAGG
AATCCTCCTCCCTACAGATTACTTCCAGAAAGGAGAGCCAGTGATGTAGGTTCTGCTTCT
AAGGGAGTAGTTGGGAGATCTAGCAGCTGTGAAAGAACTGAAAGGAAGAGCGAAAAGGAA
AAGGAAAAGGAAAAGGAAAAGGAAAGGGAACTCTTGAGGTCTGACAGTGCCAGGTTGTTT
AGGCGTATCCCGTCTTCCCCATCTCTCCTCTTGAGTGGCATGAAAAAGAGAGTGGATTGC
ATAAGGAAGAAGCCCTCAGTTGTTGGTGATGATAGCGATGAAGGTCGGGTAGGAGGTAAT
GGCTTCATAAGATCATCCATCAAAACAATCAAGAAAGCAGTGAAGATGTAG

Peptide Sequence

PEP ID

XP_016486716.1
PEP Infomation

PREDICTED: stress response protein nst1-like [Nicotiana tabacum]
Sequence

MAGDLVFTPEEMVIDKGLGYPKAYAKICKDRSFGPFSRGPPFAFTPYSLPHHEVLRAKEL
DDMFPIIDPNAQPSTKPKIFLSLLWKQLNHLGNAGFDPEVFRVDSYGNVLYYHADSASPL
AWKIDHWFPCSRGGLTVPSNLRIMQWQSCKKKNNKLEFLIPWWDLQVGISINQFLSIFAI
SNSDFRRRAFSWLFSEGENEELNASQTVDSHVFPHHFVESQEKIGLAPAAVVLSRRESFD
SSSTLKSLDINRRPRSNTPIVAYKRSKADLKENEDPGMVTNPYQAIVMARDSLRHREETS
KMQAEIQKLDDEVGELKQKTEEEKAAVEELELVLIKKRRRAEKCRRLAEAQSSYRAMLEK
MIRDAMHQSVVYKEQVRLNQAAANALMARLEAQRAICDSAERELHKRFKYRDELEQQIRP
EWDQTRKRSRMDEFPDEEGDEKTLLCLPGSSSRAELEKDDQRVLCLPGMKSNDSMHKELR
VFLDEEQKAYEARLSLNGGQEKERQSDKAIVQAKDEDPTEKKIQNTEIQEEGITYNAGFP
TFHEAEREEEDDESRKQRGKGNVEKWLQLLLDNSQEPTNFSVQTAEENNNGKKTLNAGED
ETNEIDGTIRKQNIRHPQNEIKKSRSEESEIAEKQPQKAAKQLDKEIQIRHPQNEIKKSR
SEESEIAEDVKQPQKAAKQLEETKREEIVEMAERKSSFSNREIGKKEERTELKGQKTPSR
NPPPYRLLPERRASDVGSASKGVVGRSSSCERTERKSEKEKEKEKEKERELLRSDSARLF
RRIPSSPSLLLSGMKKRVDCIRKKPSVVGDDSDEGRVGGNGFIRSSIKTIKKAVKM

Transcript Sequence

Gene sequence data has not been registered.